Detailed gene information

Genes [306]




SOC1, AGL20
SUPPRESSOR OF OVEREXPRESSION OF CO 1 , AGAMOUS-LIKE 20
TAIR: AT2G45660
UNIPROT: O64645
NOWOMICS: View List

Publications

Onouchi H et al., 2000, Plant Cell
Lee H et al., 2000, Genes Dev.
Hepworth S R et al., 2002, EMBO J.
Moon J et al., 2003, Plant J.
Yoo S K et al., 2005, Plant Physiol.
Helliwell C A et al., 2006, Plant J.
Liu C et al., 2008, Development
Lee J et al., 2008, Plant J.
Seo E et al., 2009, Plant Cell
Lee J et al., 2010, J. Exp. Bot.
Immink R G H et al., 2012, Plant Physiol.
Hou X et al., 2014, Nat Commun
Kimura Y et al., 2015, Plant Cell Physiol.

Appears in the following schemes

Overview
Temperature pathway
Hormone pathway
Aging pathway
Photoperiod pathway
Sugar pathway
Flower development
Mains targets of ABC(E)genes
Specification of flower meristems
Vernalization

Protein function

Encodes a MADS-box transcription factor.

Phenotype

Overexpressor:
SOC1 overexpressor is early flowering under both SD and LD conditions. [Lee et al., 2000][Liu et al., 2008][Yoo et al., 2005][Samach et al., 2000]

Single mutant:
soc1 single mutant is late flowering under both SD and LD conditions. [Lee et al., 2000][Liu et al., 2008][Dorca-Fornell et al., 2011][Yoo et al., 2005][Samach et al., 2000][Searle et al., 2006][Moon et al., 2005]

Remarks:
soc1 single mutant is less sensitive to gibberellins. [Moon et al., 2003]

Function:
Transcription activator active in flowering time control. May integrate signals from the photoperiod, vernalization and autonomous floral induction pathways. Can modulate class B and C homeotic genes expression. When associated with AGL24, mediates effect of gibberellins on flowering under short-day conditions, and regulates the expression of LEAFY (LFY), which links floral induction and floral development. [Data from UniProt]

Regulators, targets and interactors

Downstream actors

causality
AGL24 -- [Immink et al., 2012][Lee et al., 2008][Liu et al., 2008][Michaels et al., 2003] -- [View TAIR record]

SPL3 -- [Jung et al., 2012] -- [View TAIR record]

SEP3 -- [Liu et al., 2009][Liu et al., 2013][Immink et al., 2012] -- [View TAIR record]

AGL72 -- [Dorca-Fornell et al., 2011] -- [View TAIR record]

SMZ -- [Immink et al., 2012] -- [View TAIR record]

SOC1, AGL20 -- [Immink et al., 2012] -- [View TAIR record]

SPL5 -- [Jung et al., 2012] -- [View TAIR record]

AGL71 -- [Dorca-Fornell et al., 2011] -- [View TAIR record]

CBF1, DREB1B -- [Immink et al., 2012] -- [View TAIR record]

MIR156E -- [Immink et al., 2012] -- [View TAIR record]

LFY -- [Immink et al., 2012][Lee et al., 2008][Dorca-Fornell et al., 2011][Liu et al., 2008][Michaels et al., 2003] -- [View TAIR record]

SPL4 -- [Jung et al., 2012] -- [View TAIR record]

ICE1, SCRM -- [Lee et al., 2015] -- [View TAIR record]

AGL42, FYF -- [Dorca-Fornell et al., 2011] -- [View TAIR record]

AP3 -- [Immink et al., 2012] -- [View TAIR record]



Upstream actors

causality
NF-YB1, HAP3A -- [Hou et al., 2014] -- [View TAIR record]

FD -- [Wang et al., 2009][Moon et al., 2005][Yamaguchi et al., 2005][Searle et al., 2006][Michaels et al., 2005][Yoo et al., 2005][Jang et al., 2009] -- [View TAIR record]

SEP3 -- [Wuest et al., 2012][Gregis et al., 2008][Kaufmann et al., 2010][Liu et al., 2007] -- [View TAIR record]

NF-YB5 -- [Hou et al., 2014] -- [View TAIR record]

REF6, JMJ12 -- [Lu et al., 2011] -- [View TAIR record]

SHL1, SHL -- [López-González et al., 2014] -- [View TAIR record]

NF-YB10 -- [Hou et al., 2014] -- [View TAIR record]

SVP -- [Li et al., 2008][Posé et al., 2013][Gu et al., 2013][Deng et al., 2011][Searle et al., 2006][Helliwell et al., 2006][Tao et al., 2012][Lee et al., 2013][Gregis et al., 2013][Mateos et al., 2015][Hepworth et al., 2002] -- [View TAIR record]

NF-YC9, HAP5C -- [Hou et al., 2014] -- [View TAIR record]

SPL9 -- [Wang et al., 2009] -- [View TAIR record]

NF-YC7 -- [Hou et al., 2014] -- [View TAIR record]

MAF3, AGL70 -- [Gu et al., 2013] -- [View TAIR record]

FT -- [Wang et al., 2009][Moon et al., 2005][Searle et al., 2006][Michaels et al., 2005][Yoo et al., 2005] -- [View TAIR record]

AP1 -- [Wuest et al., 2012][Gregis et al., 2008][Kaufmann et al., 2010][Liu et al., 2007] -- [View TAIR record]

NF-YB3, HAP3C -- [Hou et al., 2014] -- [View TAIR record]

SOC1, AGL20 -- [Immink et al., 2012] -- [View TAIR record]

AP3 -- [Wuest et al., 2012] -- [View TAIR record]

NF-YB6, L1L -- [Hou et al., 2014] -- [View TAIR record]

FLC, AGL25, FLF -- [Li et al., 2008][Deng et al., 2011][Searle et al., 2006][Helliwell et al., 2006][Tao et al., 2012][Gregis et al., 2013][Mateos et al., 2015][Hepworth et al., 2002] -- [View TAIR record]

NF-YC2, HAP5B -- [Hou et al., 2014] -- [View TAIR record]

FUL, AGL8 -- [Balanzà et al., 2014][Immink et al., 2012][de Folter et al., 2005] -- [View TAIR record]

NF-YC3 -- [Hou et al., 2014] -- [View TAIR record]

SMZ -- [Yant et al., 2010][Mathieu et al., 2009] -- [View TAIR record]

NF-YC5 -- [Hou et al., 2014] -- [View TAIR record]

AGL24 -- [Lee et al., 2008][Liu et al., 2008] -- [View TAIR record]

NF-YB2, HAP3B -- [Hou et al., 2014] -- [View TAIR record]

TSF -- [Yamaguchi et al., 2005][Jang et al., 2009] -- [View TAIR record]

PI -- [Wuest et al., 2012] -- [View TAIR record]

NF-YB9, LEC1 -- [Hou et al., 2014] -- [View TAIR record]

AGL15 -- [Immink et al., 2012] -- [View TAIR record]

BAF60, CHC1 -- [Sacharowski et al., 2015] -- [View TAIR record]

NF-YC1, HAP5A -- [Hou et al., 2014] -- [View TAIR record]

STM, SHL, WAM1 -- [López-González et al., 2014] -- [View TAIR record]

NF-YC4 -- [Hou et al., 2014] -- [View TAIR record]

AP2 -- [Yant et al., 2010][Mathieu et al., 2009] -- [View TAIR record]

NF-YC6 -- [Hou et al., 2014] -- [View TAIR record]

FLM, MAF1, AGL27 -- [Posé et al., 2013][Gu et al., 2013][Lee et al., 2013] -- [View TAIR record]



Protein-protein interactions

AGL24 -- [Immink et al., 2012][Lee et al., 2008][Liu et al., 2008][Michaels et al., 2003] -- [View TAIR record]


FT -- [Wang et al., 2009][Moon et al., 2005][Searle et al., 2006][Michaels et al., 2005][Yoo et al., 2005] -- [View TAIR record]

PIN1AT -- [Wang et al., 2010] -- [View TAIR record]

SAP18 -- [Liu et al., 2009] -- [View TAIR record]

ICE1, SCRM -- [Lee et al., 2015] -- [View TAIR record]

FD -- [Wang et al., 2009][Moon et al., 2005][Yamaguchi et al., 2005][Searle et al., 2006][Michaels et al., 2005][Yoo et al., 2005][Jang et al., 2009] -- [View TAIR record]

FUL, AGL8 -- [Balanzà et al., 2014][Immink et al., 2012][de Folter et al., 2005] -- [View TAIR record]



SOC1, AGL20 interaction network

Downstream and upstream flowering-related genes

Physical interactions with other flowering-related proteins